Bacteriology and Microbacteria

Research output

Research output per year 2014 2018 2019 2021 2024

• 357 Citations
• 7 h-index
• 13 Article in an indexed scientific journal
• 13 Social ownership of knowledge
• 8 Working paper
• 4 Review article
• 7 More
  • 3 Other type of book published
  • 1 Conference and proceedings
  • 1 Poster
  • 1 Article
  • 1 Training of human resources

Research output per year

Research output per year

Search results

• 2024

  Deciphering the lung microbiota in COVID-19 patients: insights from culture analysis, FilmArray pneumonia panel, ventilation impact, and mortality trends

  Molina Saldarriaga, F. J., Botero Palacio, L. E., Isaza Agudelo, J. P., Cano, L. E., Lopez Lopez, L., Arévalo , Á., Moreno, I., Pérez Restrepo, L., Úsuga, J., Ciuoderis, K., Hernández, J. P., López Aladid, R., Fernández, L. & Torres, A., 3 Dec 2024, In: Scientific Reports. 14

  Research output: Contribution to journal › Article in an indexed scientific journal › peer-review

• Mortality predictors in critically ill patients with severe COVID-19 pneumonia: A multicenter observational study in Colombia

  Molina Saldarriaga, F. J., Botero, L. E., Isaza, J. P., López, L., González, M. A., Gil, B. A., Echeverri, J. L., Uribe, J. D., Ángel, V. E., Fonseca, N. J., Sitton, S., González, A., Arias, J. M., Zapata, F. L., Gallego, J. A., Cortés, A. S., Giraldo, D., Mazo, A., Aguilar, C. & Ruiz, V. & 10 others, Molina, J. J., Vélez, I., García, L. M., Archbold, D. D., Alarcón, P. A., Tamayo, L., Hoyos, L. M., Acosta, J. P., Escobar, L. M. & Torres, A., 2024, In: Acta Colombiana de Cuidado Intensivo. 24, 2

  Research output: Contribution to journal › Article in an indexed scientific journal › peer-review

  • Observational Study 100%
  • Artificial Respiration 100%
  • COVID-19 100%
  • Chronic Kidney Failure 100%
  • Intensive Care Unit 60%

• Protocol for the selection of Mycobacterium tuberculosis spontaneous resistant mutants to D-cycloserine

  Osorio-González, A., Álvarez, N., Realpe, T. & Robledo, J., Jun 2024, In: MethodsX. 12, 102690.

  Research output: Contribution to journal › Article in an indexed scientific journal › peer-review

  Open Access

  • Mycobacterium Tuberculosis 100%
  • Cycloserine 100%
  • Spontaneous Mutation 25%
  • Minimum Inhibitory Concentration 25%

• Utilidad del Xpert® MTB/RIF Ultra en materia fecal para el diagnóstico de tuberculosis pulmonar infantil

  Vera Marin, C. (Methodological advisor), Realpe Quintero, T. D. J. (Scientific advisor) & Vélez Molina, J. D. (Author master's student), 30 Jan 2024, (Accepted/In press)

  Research output: Other contribution › Training of human resources › peer-review
• 2023

  Cost-Effectiveness Analysis of Procalcitonin Compared to C-Reactive Protein (CRP) in Patients with Exacerbations of Chronic Obstructive Pulmonary Disease (COPD) in the Intensive Care Unit (ICU) in Medellín – Colombia

  Barrientos Gomez, J. G., Molina Saldarriaga, F. J. (Co-author), Villegas Arbeláez, E., Niño, R., Ballesteros NOVA, P. & Sánchez Gómez, J., Jun 2023, ISPOR. VALUE IN HEALTH: ISPOR 2023: Impacting Innovation, Value, and healthcare Decision Making. 6-S1-S426 ed. Elsevier, Vol. 26.

  Research output: Chapter in Book/Report/Conference proceeding › Conference and proceedings › peer-review

  Open Access

• Evento científico póster. Identification of mycobacterium tuberculosis mutations related with d-cycloserine resistance using phenotypic and genomic approaches

  Realpe Quintero, T. D. J., 2023, Colombia : Universidad Pontificia Bolivariana.

  Research output: Other contribution › Social ownership of knowledge

• Implementation of an integrated care strategy for child contacts of tuberculosis patients: a quasi-experimental study protocol

  Benjumea-Bedoya, D., Villegas Arbeláez, E., Martínez-Peñaloza, D., Beltrán-Arroyave, C. P., Restrepo Gouzy, A. V., Marín, D., Cadavid Álvarez, L. M., Molinares, B., Montes Zuluaga, F. N., Pulido Duarte, H., Suárez Parra, P. M., Alzate Ángel, J. C., Vélez-Parra, G., Realpe, T., Vásquez Villa, M., Ríos Buitrago, S. Y., Puerta Zapata, J., Arango García, L. M., Perea Torres, Y. & Pérez Doncel, N. (Author undergraduate student) & 2 others, Arbeláez Montoya, M. P. & Robledo, J., 19 Jan 2023, In: BMC Pediatrics. 23, 1, 28.

  Research output: Contribution to journal › Article in an indexed scientific journal › peer-review

  • Lung Tuberculosis 100%
  • Household 100%
  • Latent Tuberculosis 100%
  • Childhood Tuberculosis 100%
  • Nursing Staff 50%

• Pan-genome association study of Mycobacterium tuberculosis lineage-4 revealed specific genes related to the high and low prevalence of the disease in patients from the North-Eastern area of Medellín, Colombia

  Hurtado-Páez, U., Álvarez Zuluaga, N., Arango Isaza, R. E., Contreras-Moreira, B., Rouzaud, F. & Robledo, J., 4 Jan 2023, In: Frontiers in Microbiology. 13, 1076797.

  Research output: Contribution to journal › Article in an indexed scientific journal › peer-review

  Open Access

  • Lineages 100%
  • Prevalence 100%
  • Mycobacterium Tuberculosis 100%
  • Genetic Difference 20%
  • Genome-Wide Association Study 20%
  4 Scopus citations

• Qualitative comparison of the lung microbiota, FilmArray ® pneumonia panel and lung culture in patients with COVID-19 pneumonia in Intensive Care Unit

  Molina Saldarriaga, F. J., 5 Oct 2023.

  Research output: Contribution to conference › Poster
• 2022

  Updating the approaches to define susceptibility and resistance to anti-tuberculosis agents: implications for diagnosis and treatment

  Antimycobacterial Susceptibility Testing Group, 1 Apr 2022, In: European Respiratory Journal. 59, 4, 2200166.

  Research output: Contribution to journal › Review article › peer-review

  Open Access
  19 Scopus citations
• 2021

  Demás trabajos. Manejo del paciente con infección por sars-cov-2/covid-19

  Molina Saldarriaga, F. J. (Author doctoral student), 2021, Editorial Universidad Pontificia Bolivariana.

  Research output: Working paper

• Enfoque del paciente en medicina intensiva 1a edición

  Molina Saldarriaga, F., 2021, Universidad Pontificia Bolivariana.

  Research output: Other contribution › Social ownership of knowledge

• Evento científico capítulo en memoria con ISSN o ISBN.pd-654-12 detection of m.tuberculosis in extra-pulmonary specimens:comparison between x pert mtb/rif and screening for multi-drug resistance using

  Cadavid Bustamante, C., Zapata Fernandez, E., Mejía Mesa, G., Robledo Restrepo, J. A. & Hernandez Sarmiento, J. M., 2021, Colombia : Universidad Pontificia Bolivariana.

  Research output: Other contribution › Social ownership of knowledge

• Evento científico póster. Perfil de susceptibilidad a antibióticos en especies de micobacterias no tuberculosas en Medellín, Colombia 2010-2019.

  Mejía Mesa, G., Robledo Restrepo, J. A. & Londoño, L., 2021, Colombia : Universidad Pontificia Bolivariana.

  Research output: Other contribution › Social ownership of knowledge

• Otros. Colección MICROCIB

  Robledo Restrepo, J. A., 2021, Editorial Universidad Pontificia Bolivariana.

  Research output: Working paper

• Otros. Mycobacterium africanum strain ut307 genome

  Robledo Restrepo, J. A., 2021, Editorial Universidad Pontificia Bolivariana.

  Research output: Working paper

• Otros. Mycobacterium tuberculosis strain tbr-102, whole genome shotgun sequencing project

  Robledo Restrepo, J. A., 2021, Editorial Universidad Pontificia Bolivariana.

  Research output: Working paper

• Otros. Mycobacterium tuberculosis strain tbr-103, whole genome shotgun sequencing project

  Robledo Restrepo, J. A., 2021, Editorial Universidad Pontificia Bolivariana.

  Research output: Working paper

• Otros. Mycobacterium tuberculosis strain tbr-152, whole genome shotgun sequencing project

  Robledo Restrepo, J. A., 2021, Editorial Universidad Pontificia Bolivariana.

  Research output: Working paper

• Otros. Mycobacterium tuberculosis strain tbr-175, whole genome shotgun sequencing project

  Robledo Restrepo, J. A., 2021, Editorial Universidad Pontificia Bolivariana.

  Research output: Working paper

• Otros. Protocolo para análisis de metilación en el ADN.

  Alvarez Zuluaga, N., Robledo Restrepo, J. & Rueda V, Z., 2021, Universidad Pontificia Bolivariana.

  Research output: Working paper
• 2020

  Adverse treatment outcomes in multidrug resistant tuberculosis are beyond the microbe drug interaction: Results of a multiple correspondence analysis

  Tobón, Á., Rueda, J., Cáceres, D. H., Mejía, G. I., Zapata, E. M., Montes, F., Ospina, A., Fadul, S., Paniagua, L. & Robledo, J., 2020, In: Biomedica. 40

  Research output: Contribution to journal › Article in an indexed scientific journal › peer-review

  • Multidrug Resistant Tuberculosis 100%
  • Writing 100%
  • Drug Interaction 100%
  • Tuberculosis Treatment 16%
  • Human Immunodeficiency Virus 16%
  3 Scopus citations

• Protocolos para caracterización de no tejidos conformados por nanofibras of pristine and n-doped carbon nanotubes.

  Galeano Upegui, B. J., Cuesta Castro, D. P., Ortiz Trujillo, I. C., Hoyos Palacio, L. M., Botero Palacio, L. E. & Escobar Mora, N. J., 16 Oct 2020, Universidad Pontificia Bolivariana.

  Research output: Book/Report › Other type of book published
• 2019

  Evento científico capítulo en memoria con ISSN o ISBN. Pan-genome analysis of mycobacterium tuberculosis lineage 4 isolates and their association with prevalence of the disease in northeastern area of

  Robledo Restrepo, J. A., 2019, Colombia : Universidad Pontificia Bolivariana.

  Research output: Other contribution › Social ownership of knowledge

• Evento científico organizador. Foro de zoonosis: responsabilidad de la salud pública en la región del norte de Antioquia: tuberculosis y brucelosis

  Mejía Mesa, G., Robledo Restrepo, J. A. & Rueda Flórez, J., 2019, Colombia : Universidad Pontificia Bolivariana.

  Research output: Other contribution › Social ownership of knowledge

• Evento científico póster. Genómica comparativa de aislamientos clínicos de mycobacterium tuberculosis linaje 4 de alta y baja prevalencia en la zona nor-oriental de Medellín - Colombia.

  Robledo Restrepo, J. A., 2019, Colombia : Universidad Pontificia Bolivariana.

  Research output: Other contribution › Social ownership of knowledge

• Evento científico póster. Optimization of silver nanoparticles synthesis method and evaluation of its antibacterial activity

  Quintero Quiroz, C., Saldarriaga Escobar, J. E., Botero Palacio, L. E. & Perez Ariza, V. Z., 2019, Colombia : Universidad Pontificia Bolivariana.

  Research output: Other contribution › Social ownership of knowledge

• Evento científico póster. Perfil clínico de las infecciones del tracto respiratorio inferior en pacientes con fibrosis quística, estudio multicéntrico en Medellín. 2018

  Cardona Echandía, A., Cuesta Castro, D. P., Botero Palacio, L. E. & Baena García, S., 2019, Colombia : Universidad Pontificia Bolivariana.

  Research output: Other contribution › Social ownership of knowledge

• Generación de contenido impreso. Tuberculosis bovina prevalencia de tuberculosis bovina latente y activa entre trabajadores expuestos a bovinos en fincas lecheras de Antioquia, Colombia.

  Mejia, I., Robledo Restrepo, J. A. & Botero Palacio, L. E., 19 Feb 2019, Colombia : Universidad Pontificia Bolivariana.

  Research output: Other contribution › Social ownership of knowledge

• Ponencia publicada en las memorias del evento, con ISBN. Identificación microbiológica y molecular de mycobacterium bovis en biopsias de bovinos tuberculina positiva

  Mejia Mesa, G., Robledo Restrepo, J. A., Rueda Flórez, J. & Botero Palacio, L. E., 2019, Colombia : Universidad Pontificia Bolivariana.

  Research output: Other contribution › Social ownership of knowledge

• Ponencia publicada en las memorias del evento, con ISBN. Prevalencia de tuberculosis latente y activa en población humana relacionada con animales destinadas a la producción de la leche y carne en anti

  Mejía Mesa, G., Robledo Restrepo, J. A., Rueda Flórez, J. & Botero Palacio, L. E., 2019, Colombia : Universidad Pontificia Bolivariana.

  Research output: Other contribution › Social ownership of knowledge

• Ponencia publicada en las memorias del evento con ISBN. Prevalencia de tuberculosis latente en trabajadores de fincas ganaderas del norte y bajo cauca de Antioquia: resultados preliminares.

  Mejia Mesa, G., Robledo Restrepo, J. A., Rueda Flórez, J. & Botero Palacio, L. E., 2019, Colombia : Universidad Pontificia Bolivariana.

  Research output: Other contribution › Social ownership of knowledge

• Protocolos para caracterización de no tejidos conformados por nanofibras

  Galeano Upegui, B. J., Cuesta Castro, D. P., Ortiz Trujillo, I. C., Hoyos Palacio, L. M., Botero Palacio, L. E., Mejia, M. & Escobar Mora, N. J., 16 Dec 2019, Universidad Pontificia Bolivariana.

  Research output: Book/Report › Other type of book published

• Salud Pública. Enfoque preventivo, integrado y práctico

  Uribe Rios, M. (Editor), Guarin Alzate, G. J. (Editor), Giraldo Jaramillo, C. A., Torres Trujillo, L. E., Donado Gomez, J. H., Lopez Herrera, F. E., Flórez Bedoya, A. R., Alvarez Tobon, V. A., Calderon Bejarano, H., Zapata Henao, L. C., Botero Palacio, L. E., Rodriguez Padilla, L. M., Angarita Martínez, A., Gutierrez Builes, L. A., Orozco Jiménez, L. Y., Ortiz Trujillo, I. C., Tobón, S. R., Gomez Hoyos, B. E., Ortiz Muñoz, G. M. & Tibaduiza Pineda, J. F. & 42 others, Gómez García, G. F., Cabrera Orrego, R., Correa Arango, A. L., Bedoya Zapata, L. M., Cortés Fonnegra, L. M., González Rojas, L. J., Restrepo Restrepo, N., Franco Vasquez, J. G., Alvarez Gomez, M. L., Velez Angel, M. C., Ochoa Vasquez, L. C., Suarez Escudero, J. C., Naranjo Ramirez, G. P., Zuleta Salas, G. L., Valencia Duarte, A. V., Luna Gomez, I. F., Flórez Arango, J. F., Torres Silva, E. A., Willard Smith, J., Restrepo Molina, C. A., Alcaraz Otálvaro, W. A., Guzmán Hurtado, A., Barrientos Gomez, J. G., Rueda Vallejo, Z. V., Marin Pineda, D. M., Lopez Lopez, L., Tirado Otalvaro, A. F., Krikorian Daveloza, A., Martinez Sanchez, L. M., Hernandez Sarmiento, J. M., Mejía Montoya, C. M., Betancur Betancur, M. J., Perez Garcia, J., Arenas González, D. C., Jiménez Herrera, A. L., Puerta Echeverri, S. M., Torres Alzate, J. A., Ramirez Carmona, M. E., Rendon Castrillon, L. J., Carmona Garces, D. M., Ocampo Lopez, C. & Velez Salazar, Y. H., 11 Oct 2019, 1 ed. Medellín: Universidad Pontificia Bolivariana. 568 p.

  Research output: Book/Report › Other type of book published
• 2018

  Adverse events in critical care: Search and active detection through the Trigger Tool

  Barrientos Gomez, J. G., Molina Saldarriaga, F. J., Rodas, D., Rivera, P. T., Cardona, A., Restrepo Yepes, D. C. & Monroy Pérez, O., 4 Feb 2018, World Journal of Critical Care Medicine.

  Research output: Contribution to specialist publication › Article

  Open Access

• Caracterización de los procedimientos para la realización de hemocultivos en pacientes adultos, en instituciones hospitalarias del área Metropolitana del Valle de Aburrá

  Translated title of the contribution: Characterization of procedures for performing blood cultures in adult patients, in hospitals of the Metropolitan Area of Aburrá ValleyMaldonado, N., Robledo, C., Munera, M. I., Capataz-Tafur, C., Roncancio, G., Franco, L., Nagles, J., Gil, J., Arenas, P., Gaviria, M., Figueroa-Echeverri, M. & Robledo, J., 8 Feb 2018, In: Infectio. 22, 1, p. 19-25 7 p.

  Research output: Contribution to journal › Article in an indexed scientific journal › peer-review

  • 2 Propanol 100%
  • Vein Puncture 100%
  • Alcohol 100%
  • Chlorhexidine Gluconate 100%
  • Post-Analytical Phase 100%
  3 Scopus citations

• Comparative study of Candida spp. isolates: Identification and echinocandin susceptibility in isolates obtained from blood cultures in 15 hospitals in Medellín, Colombia

  Berrio, I., Maldonado, N., De Bedout, C., Arango, K., Cano, L. E., Valencia, Y., Jiménez-Ortigosa, C., Perlin, D. S., Gómez, B. L., Robledo, C. & Robledo, J., 1 Jun 2018, In: Journal of Global Antimicrobial Resistance. 13, p. 254-260 7 p.

  Research output: Contribution to journal › Article in an indexed scientific journal › peer-review

  • Antifungal Susceptibility 100%
  13 Scopus citations

• Genome-wide analysis of multi- and extensively drug-resistant Mycobacterium tuberculosis

  Coll, F., Phelan, J., Hill-Cawthorne, G. A., Nair, M. B., Mallard, K., Ali, S., Abdallah, A. M., Alghamdi, S., Alsomali, M., Ahmed, A. O., Portelli, S., Oppong, Y., Alves, A., Bessa, T. B., Campino, S., Caws, M., Chatterjee, A., Crampin, A. C., Dheda, K. & Furnham, N. & 31 others, Glynn, J. R., Grandjean, L., Minh Ha, D., Hasan, R., Hasan, Z., Hibberd, M. L., Joloba, M., Jones-López, E. C., Matsumoto, T., Miranda, A., Moore, D. J., Mocillo, N., Panaiotov, S., Parkhill, J., Penha, C., Perdigão, J., Portugal, I., Rchiad, Z., Robledo, J., Sheen, P., Shesha, N. T., Sirgel, F. A., Sola, C., Oliveira Sousa, E., Streicher, E. M., Helden, P. V., Viveiros, M., Warren, R. M., McNerney, R., Pain, A. & Clark, T. G., 1 Dec 2018, In: Nature Genetics. 50, 2, p. 307-316 10 p.

  Research output: Contribution to journal › Article in an indexed scientific journal › peer-review

  • Mycobacterium Tuberculosis 100%
  • Genome Wide Association Study 100%
  • Cycloserine 100%
  • Ethionamide 66%
  • 4-Aminosalicylic Acid 66%
  240 Scopus citations

• La espectrometría de masas MALDI-TOF en el laboratorio de microbiología clínica

  Translated title of the contribution: MALDI-TOF mass spectrometry in clinical microbiology laboratoriesMaldonado, N., Robledo, C. & Robledo, J., 8 Feb 2018, In: Infectio. 22, 1, p. 35-45 11 p.

  Research output: Contribution to journal › Review article › peer-review

  • Matrix-Assisted Laser Desorption-Ionization 100%
  • Time-of-Flight Mass Spectrometry 33%
  • Mould 33%
  14 Scopus citations

• Mortalidad por tuberculosis, estudio del registro en municipios del departamento del Chocó, Colombia, 2012

  Translated title of the contribution: Tuberculosis mortality in municipalities of the department of Chocó, Colombia, 2012Hernández Sarmiento, J. M., Andrade, H., Murillo, L. E., Velásquez, L., Gómez Restrepo, A. J. & Robledo, J., 1 Jan 2018, In: Enfermedades Infecciosas y Microbiologia. 38, 2, p. 38-43 6 p.

  Research output: Contribution to journal › Review article › peer-review

  • Population Study 100%
  • Mortality Rate 100%
  • Lung Tuberculosis 100%
  • Diseases 100%
  • Information Systems 100%
  1 Scopus citations

• Resistencia a medicamentos en mycobacterium tuberculosis: Contribución de mecanismos constitutivos y adquiridos

  Translated title of the contribution: Drug resistance in mycobacterium tuberculosis: Contribution of constituent and acquired mechanismsGómez-Tangarife, V. J., Gómez-Restrepo, A. J., Robledo-Restrepo, J. & Hernández-Sarmiento, J. M., 1 Jul 2018, In: Revista de Salud Publica. 20, 4, p. 491-497 7 p.

  Research output: Contribution to journal › Review article › peer-review

  • Mycobacterium Tuberculosis 100%
  • Drug Resistance 100%
  • Tuberculostatic Agent 37%
  • Patient Compliance 25%
  • Health Care 12%
  8 Scopus citations

• Strongyloidiasis in humans: Diagnostic efficacy of four conventional methods and real-time polymerase chain reaction

  Campo-Polanco, L. F., Sarmiento, J. M. H., Mesa, M. A., Franco, C. J. V., López, L., Botero, L. E. & Builes, L. A. G., 1 Jul 2018, In: Revista da Sociedade Brasileira de Medicina Tropical. 51, 4, p. 493-502 10 p.

  Research output: Contribution to journal › Article in an indexed scientific journal › peer-review

  Open Access

  • Parasitology 100%
  7 Scopus citations

• TEXTILES FUNCIONALES COMO BARRERA DE PROTECCIÓN ANTE INFECCIONES ASOCIADAS A LA ATENCIÓN EN SALUD

  Zapata Giraldo, J., Botero Palacio, L. E., Mejía Suaza, M. L., Escobar Mora, N., Ortiz Trujillo, I., Galeano, B., Hoyos Palacio, L. & Cuesta, D., 30 Apr 2018, In: Revista EIA. 15, 29, p. 13-29 17 p.

  Research output: Contribution to journal › Article in an indexed scientific journal › peer-review
• 2016

  Draft genome sequence of a Mycobacterium africanum clinical isolate from Antioquia, Colombia

  Hurtado, U. A., Solano, J. S., Rodriguez, A., Robledo, J. & Rouzaud, F., 2 Jun 2016, In: Genome Announcements. 4, 3, e00486-16.

  Research output: Contribution to journal › Article in an indexed scientific journal › peer-review

  Open Access

  • Mycobacterium africanum 100%
  2 Scopus citations
• 2014

  Population structure among Mycobacterium tuberculosis isolates from pulmonary tuberculosis patients in Colombia

  Realpe, T., Correa, N., Rozo, J. C., Ferro, B. E., Gomez, V., Zapata, E., Ribon, W., Puerto, G., Castro, C., Nieto, L. M., Diaz, M. L., Rivera, O., Couvin, D., Rastogi, N., Arbelaez, M. P. & Robledo, J., 18 Apr 2014, In: PLoS ONE. 9, 4, e93848.

  Research output: Contribution to journal › Article in an indexed scientific journal › peer-review

  Open Access

  • Population Structure 100%
  • Tree 50%
  • Restriction Fragment Length Polymorphism 50%
  43 Scopus citations