Sequence alignment using parallel processing techniques developed on a computer cluster

Wilson Castaño Galviz; Lenin Javier Serrano Gil; Miguel Mateus Marín

Sequence alignment using parallel processing techniques developed on a computer cluster

Translated title of the contribution: Sequence alignment using parallel processing techniques developed on a computer cluster

Wilson Castaño Galviz, Lenin Javier Serrano Gil, Miguel Mateus Marín

Research output: Contribution to journal › Article in an indexed scientific journal › peer-review

Abstract

We present the development of a computer algorithm for sequence alignment, implemented on a computer cluster at the Universidad Pontificia Bolivariana, Bucaramanga Branch. It uses the Linux operating system and the OSCAR configuration tool for deploying applications in parallel. We also compare the performance of clusters with different file sizes and number of processing nodes.

Translated title of the contribution	Sequence alignment using parallel processing techniques developed on a computer cluster
Original language	English
Pages (from-to)	56-59
Number of pages	4
Journal	Acta Cientifica Venezolana
Volume	60
Issue number	3
State	Published - 2009

Keywords

Alignments
Computer cluster
MPI
OSCAR

Cite this

@article{830ecb0570b24a3caf39b954c03e3ab7,

title = "Sequence alignment using parallel processing techniques developed on a computer cluster",

abstract = "We present the development of a computer algorithm for sequence alignment, implemented on a computer cluster at the Universidad Pontificia Bolivariana, Bucaramanga Branch. It uses the Linux operating system and the OSCAR configuration tool for deploying applications in parallel. We also compare the performance of clusters with different file sizes and number of processing nodes.",

keywords = "Alignments, Computer cluster, MPI, OSCAR",

author = "{Casta{\~n}o Galviz}, Wilson and {Serrano Gil}, {Lenin Javier} and {Mateus Mar{\'i}n}, Miguel",

year = "2009",

language = "Ingl{\'e}s",

volume = "60",

pages = "56--59",

journal = "Acta Cientifica Venezolana",

issn = "0001-5504",

publisher = "Edificio FundaVAC - AsoVAC",

number = "3",

}

TY - JOUR

T1 - Sequence alignment using parallel processing techniques developed on a computer cluster

AU - Castaño Galviz, Wilson

AU - Serrano Gil, Lenin Javier

AU - Mateus Marín, Miguel

PY - 2009

Y1 - 2009

N2 - We present the development of a computer algorithm for sequence alignment, implemented on a computer cluster at the Universidad Pontificia Bolivariana, Bucaramanga Branch. It uses the Linux operating system and the OSCAR configuration tool for deploying applications in parallel. We also compare the performance of clusters with different file sizes and number of processing nodes.

AB - We present the development of a computer algorithm for sequence alignment, implemented on a computer cluster at the Universidad Pontificia Bolivariana, Bucaramanga Branch. It uses the Linux operating system and the OSCAR configuration tool for deploying applications in parallel. We also compare the performance of clusters with different file sizes and number of processing nodes.

KW - Alignments

KW - Computer cluster

KW - MPI

KW - OSCAR

UR - http://www.scopus.com/inward/record.url?scp=84874739948&partnerID=8YFLogxK

M3 - Artículo en revista científica indexada

AN - SCOPUS:84874739948

SN - 0001-5504

VL - 60

SP - 56

EP - 59

JO - Acta Cientifica Venezolana

JF - Acta Cientifica Venezolana

IS - 3

ER -

Sequence alignment using parallel processing techniques developed on a computer cluster

Abstract

Keywords

Fingerprint

Cite this