Sequence alignment using parallel processing techniques developed on a computer cluster

Wilson Castaño Galviz; Lenin Javier Serrano Gil; Miguel Mateus Marín

Sequence alignment using parallel processing techniques developed on a computer cluster

Título traducido de la contribución: Alineamiento de secuencias usando técnicas de procesamiento paralelo desarrolladas en un cluster de computadores

Wilson Castaño Galviz, Lenin Javier Serrano Gil, Miguel Mateus Marín

Producción científica: Contribución a una revista › Artículo en revista científica indexada › revisión exhaustiva

Resumen

We present the development of a computer algorithm for sequence alignment, implemented on a computer cluster at the Universidad Pontificia Bolivariana, Bucaramanga Branch. It uses the Linux operating system and the OSCAR configuration tool for deploying applications in parallel. We also compare the performance of clusters with different file sizes and number of processing nodes.

Título traducido de la contribución	Alineamiento de secuencias usando técnicas de procesamiento paralelo desarrolladas en un cluster de computadores
Idioma original	Inglés
Páginas (desde-hasta)	56-59
Número de páginas	4
Publicación	Acta Cientifica Venezolana
Volumen	60
N.º	3
Estado	Publicada - 2009

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title = "Sequence alignment using parallel processing techniques developed on a computer cluster",

abstract = "We present the development of a computer algorithm for sequence alignment, implemented on a computer cluster at the Universidad Pontificia Bolivariana, Bucaramanga Branch. It uses the Linux operating system and the OSCAR configuration tool for deploying applications in parallel. We also compare the performance of clusters with different file sizes and number of processing nodes.",

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T1 - Sequence alignment using parallel processing techniques developed on a computer cluster

AU - Castaño Galviz, Wilson

AU - Serrano Gil, Lenin Javier

AU - Mateus Marín, Miguel

PY - 2009

Y1 - 2009

N2 - We present the development of a computer algorithm for sequence alignment, implemented on a computer cluster at the Universidad Pontificia Bolivariana, Bucaramanga Branch. It uses the Linux operating system and the OSCAR configuration tool for deploying applications in parallel. We also compare the performance of clusters with different file sizes and number of processing nodes.

AB - We present the development of a computer algorithm for sequence alignment, implemented on a computer cluster at the Universidad Pontificia Bolivariana, Bucaramanga Branch. It uses the Linux operating system and the OSCAR configuration tool for deploying applications in parallel. We also compare the performance of clusters with different file sizes and number of processing nodes.

KW - Alignments

KW - Computer cluster

KW - MPI

KW - OSCAR

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M3 - Artículo en revista científica indexada

AN - SCOPUS:84874739948

SN - 0001-5504

VL - 60

SP - 56

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JO - Acta Cientifica Venezolana

JF - Acta Cientifica Venezolana

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Sequence alignment using parallel processing techniques developed on a computer cluster

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